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Title: Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient
Author: Loraine, Ann, Yao, Jianchao, Chang, Chunqi, Roux, Stanley J.
Date Created: 2008
Subjects--Topical: Genomics, Bioinformatics
Description: Background: Currently, clustering with some form of correlation coefficient as the gene similarity metric has become a popular method for profiling genomic data. The Pearson correlation coefficient and the standard deviation (SD)-weighted correlat...

Title: Genoviz Software Development Kit : Java tool kit for building genomics visualization applications
Author: Loraine, Ann, Helt, Gregg A., Nicol, John W., Erwin, Ed
Date Created: 2009
Subjects--Topical: Genomics, Software
Description: Background: Visualization software can expose previously undiscovered patterns in genomic data and advance biological science. Results: The Genoviz Software Development Kit (SDK) is an open source, Java-based framework designed for rapid assembly ...